* 시료 유도체화(Derivatization)
- Reference
• https://www.sciencedirect.com/science/article/pii/S0168165621001474#bib0080
• Before GC/MS analysis, we derivatized the extracted metabolites by methoxyamination and trimethylsilylation (Lee and Fiehn, 2008).
• The methoxyamination step began as we added 10 μL of 40 mg/mL methoxyamine chloride in pyridine (Sigma-Aldrich, St. Louis, MO, US)
to the samples and then incubated the samples for 90 min at 30 °C, shaking at 200 rpm.
• Then, we added 45 μL of N-methyl-N-trimethylsilyltrifluoroacetamide (MSTFA; Sigma-Aldrich) to the samples for trimethylsilylation and
incubated for 30 min at 37 °C and 200 rpm shaking.
- 재료 : sample, Methoxyamine hydrochloride, Pyridine, N-methyl-N-trimethylsilyl trifluoroacetamide (MSTFA)
- Process : methoxyamination, trimethylsilylation으로 유도체화
<Methoxyamination step>
• ① Methoxyamine hydrochloride 40mg(0.04g)에 Pyridine 1ml를 첨가한다. (한번에 미리 만들어 두면 석출되므로 필요할 때마다 제조한다.)
• ② ①의 용액 중 10 𝜇L를 sample에 첨가한다.
• ③ Vortexing, Centrifuge를 진행한 후 30℃ 에서 90분간 1000 rpm으로 shaking한다.
<Trimethylsilylation step>
• ④ ③의 용액에 45uL의 N-methyl-N-trimethylsilyl trifluoroacetamide을 추가하고 37℃에서 30분간 1000 rpm으로 shaking한다.
* Names of conventional derivatizing agents
- Reference
• https://link.springer.com/referenceworkentry/10.1007/978-94-007-7864-1_71-1
Method | Reagent (시약) | Common name | 통칭 |
Silylation (실릴화) | BSA | Bistrimethylsilylacetamide | 비스트리메틸실릴아세트아마이드 |
BSTFA | Bistrimethylsilyltrifluoroacetamide | 비스트리메틸실릴트리플루오로아세트아마이드 | |
HMD | Hexamethyldisilane | 헥사메틸디실란 | |
MSTFA | N-methyl-trimethylsilyltrifluoroacetamide | N-메틸-트리메틸실릴트리플루오로아세트아미드 | |
MTBSTFA | N-methyl-N-t-butyldimethylsilyltrifluoroacetamide | N-메틸-Nt-부틸디메틸실릴트리플루오로아세트아미드 | |
TMCS | Trimethylchlorosilane | 트리메틸클로로실란 | |
TMS-DEA | Trimethylsilyldiethylamine | 트리메틸실릴디에틸아민 | |
TMSI | Trimethylsilylimidazole | 트리메틸실릴이미다졸 | |
Acylation (아실화) | HFBA | Heptafluorobutyric Anhydride | 헵타플루오로부티르산 무수물 |
HFBI | Heptafluorobutyrylimidazole | 헵타플루오로부티릴이미다졸 | |
MBTFA | N-Methyl-bis(trifluoroacetamide) | N -메틸-비스(트리플루오로아세트아미드) | |
PFBCI | Pentafluorobenzoyl Chloride | 펜타플루오로벤조일 클로라이드 | |
PFPA | Pentafluoropropionic Anhydride | 펜타플루오로프로피온산 무수물 | |
PFPI | Pentafluoropropionylimidazole | 펜타플루오로프로피오닐이미다졸 | |
TFAA | Trifluoroacetic Anhydride | 트리플루오로아세트산 무수물 | |
TFAI | Trifluoroacetylimidazole | 트리플루오로아세틸이미다졸 | |
Alkylation (알킬화) | BF3(BCl3) | in methanol or butanol | - |
DMA | dimethylacetal | 디메틸아세탈 | |
PFBBr | Pentafluorobenzyl bromide | 펜타플루오로벤질 브로마이드 | |
TBH | Tetrabutylammonium hydroxide | 수산화테트라부틸암모늄 |
도말법 (Spreading & Streaking) (0) | 2023.08.12 |
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Streaking (고체배지에 균주 접종) (0) | 2023.03.24 |
Colony counting (0) | 2023.03.24 |
Spreading (고체배지에 균주 접종) (0) | 2023.03.24 |
균주 희석 (0) | 2023.03.24 |
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